PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA19552.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family SBP
Protein Properties Length: 188aa    MW: 21986.1 Da    PI: 6.5117
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA19552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP122.22.3e-3866142177
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                 +Cqv++C+ dl  a++yhrrhkvCe+h+ka vv + g  qr+CqqCsrfh++s+fD++krsCr+rLa+hn+rrrk +
  OVA19552.1  66 CCQVDNCDRDLGGARRYHRRHKVCEQHAKAVVVSIGGAAQRYCQQCSRFHDISQFDDTKRSCRKRLAGHNQRRRKIN 142
                 6**************************************************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MKKHEFYEDE EEDEDENEEE GENDGGDEEE EVEEEEERRR KRVVIRFSGE RKGVSISSLS  60
SQTRLCCQVD NCDRDLGGAR RYHRRHKVCE QHAKAVVVSI GGAAQRYCQQ CSRFHDISQF  120
DDTKRSCRKR LAGHNQRRRK INSDLQAQED AEPAVSDMND RSWGSRGHPE RMAMTVRAKP  180
SFKHFQIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60030.12e-33SBP family protein