PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19589.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 337aa MW: 37637.1 Da PI: 7.0289

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56	9.3e-18	25	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Edell+++v++ G g+W+t +++ g+ R++k+c++rw +yl OVA19589.1 25 RGPWTPDEDELLANYVRREGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 72 89****************************99**********97 PP
2	Myb_DNA-binding	46.9	6.4e-15	83	123	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l OVA19589.1 83 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 123 89*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MASSSSKNSS KSTKTPCCGK VGLKRGPWTP DEDELLANYV RREGEGRWRT LPKRAGLLRC 60 GKSCRLRWMN YLRPSVKRGQ IAPDEEDLIL RLHRLLGNRW SLIAGRIPGR TDNEIKNYWN 120 THLSKKLISQ GIDPRTHKPL LINPNPNEVV PSSSSVLLLP PPVVEPPAST VPKPINPNIP 180 SLDNSSTSIS SHEIGFGCNN NEVVDNKGNN DLQYLKGISG AALDNNQDHN LKNSDGLMIM 240 GLQNMEEDHD IEYNNDDIFS SFLNSLINEE VFVHQQHQQP QPQPQQQPIN VINSLPDHHH 300 HQYPLGSSAQ TFGYGVIMEA AFSSSTTHHA FNQEPDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	2e-77	MYB family protein