PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA19675.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB_related

Protein Properties

Length: 502aa MW: 55462.6 Da PI: 6.5171

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA19675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.2	2.9e-16	44	88	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++++a +++G W++I +++g ++t+ q++s+ qk+ OVA19675.1 44 RERWTEEEHKKFLEALRLYGRA-WRRIEEHIG-TKTAVQIRSHAQKF 88 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MDGSRICLDV GLQSGNAVLL KENYSSGDEN APKARKPYTI TKQRERWTEE EHKKFLEALR 60 LYGRAWRRIE EHIGTKTAVQ IRSHAQKFFS KVARESSSKD AGSVRPIEIP PPRPKRKPMH 120 PYPRKIVHST KKRIAVSEQP ERSMSPNLSV SEEENRSPTS VLSAAGSETM GSMISNPHSG 180 SQSPISSIAG ANPVSSLPPK QENGYPSSSS LAEEENGSSC GSTKDQSSMK NDFCSKDGTS 240 EEGGTMEAPT VSLKLFGRTV LVTDSHRPSS SSSGICKSSV TESQQENFDK NDGKILETSQ 300 CNPTQCDFVV ESNSTVWSHW PSVFCNMQFQ NVNSSPMEAA ASSASSLHWW ALYGGLPVPF 360 TSPFNSNSIQ MPQNHCLVDA SEKRKIQNPS LEDAEERKIQ NKEESGTSSN TSSTSEVEMA 420 EKNADFVNCR SQETYSEEEE KEVDLFLRLK PSETSETLKQ KTSSEKCMKG FVPYKRCLAE 480 SDIQSSGIVG EEREGQRIRL CL

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MDGSRICLDV GLQSGNAVLL KENYSSGDEN APKARKPYTI TKQRERWTEE EHKKFLEALR  60
LYGRAWRRIE EHIGTKTAVQ IRSHAQKFFS KVARESSSKD AGSVRPIEIP PPRPKRKPMH  120
PYPRKIVHST KKRIAVSEQP ERSMSPNLSV SEEENRSPTS VLSAAGSETM GSMISNPHSG  180
SQSPISSIAG ANPVSSLPPK QENGYPSSSS LAEEENGSSC GSTKDQSSMK NDFCSKDGTS  240
EEGGTMEAPT VSLKLFGRTV LVTDSHRPSS SSSGICKSSV TESQQENFDK NDGKILETSQ  300
CNPTQCDFVV ESNSTVWSHW PSVFCNMQFQ NVNSSPMEAA ASSASSLHWW ALYGGLPVPF  360
TSPFNSNSIQ MPQNHCLVDA SEKRKIQNPS LEDAEERKIQ NKEESGTSSN TSSTSEVEMA  420
EKNADFVNCR SQETYSEEEE KEVDLFLRLK PSETSETLKQ KTSSEKCMKG FVPYKRCLAE  480
SDIQSSGIVG EEREGQRIRL CL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	2e-51	MYB_related family protein