PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA20127.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family Trihelix
Protein Properties Length: 561aa    MW: 65279 Da    PI: 4.8534
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA20127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.35.5e-25135222186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqle 86 
                 rW+++e+laL+++r+em+ ++r+++ ++ lWe vs+k+++ g++r +k+Ckek++n+ k+yk++ke+   +   ++ ++ +++f++l+
  OVA20127.1 135 RWPQEETLALLRIRSEMDAQFRDANPNGLLWEIVSRKLEQMGYHRDSKKCKEKFKNIYKYYKRTKERVPLKedDCRGRKIYKFFSELK 222
                 8*****************************************************************9877633588899999999986 PP
2trihelix83.23.5e-26417502186
    trihelix   1 rWtkqevlaLiearremeerlrrgklk.kplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW+k ev+aLi++r++me++++++ lk  plWee+s +m++ g++rs+k+Ckekwen+nk++k+   + kk  se++++cpyf++l+
  OVA20127.1 417 RWPKPEVQALITLRTSMEHKSENAVLKgPPLWEEISLAMSSMGYSRSAKKCKEKWENINKYFKRAMGNGKK-WSENEKRCPYFRELD 502
                 8*********************98877589*********************************98877776.588889******997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 561 aa     Download sequence    
MTLTDLSDDI SPFPIAGNLI HSFQTSSETE FRSPLQKLRP VRNNQYAMEY SDFPTIVDSG  60
MLPENEGSLI ESLQYGDCHQ VGVSPPSPEI EMKPPQKLLY TSRGGDKDLE EWNYSPANDT  120
EGELLEKEGG GAGNRWPQEE TLALLRIRSE MDAQFRDANP NGLLWEIVSR KLEQMGYHRD  180
SKKCKEKFKN IYKYYKRTKE RVPLKEDDCR GRKIYKFFSE LKALDNQRNE NPICETNFQD  240
NTTTIQTPDP VESPINEVGL KTSSTDDLFD EFSSDDHNDD DGGGGGDDNY DELEEEIVEP  300
SSRKRKRGTR HELKLYFENL VKDVMKKQEE MYKQLMETIE KMEKDRITRE EAWKRQEMER  360
RRRDKEMRDQ ETSRSLALIS FIEKFLGQQI HNNQSPESYP EETYEQSEYK FDSSNKRWPK  420
PEVQALITLR TSMEHKSENA VLKGPPLWEE ISLAMSSMGY SRSAKKCKEK WENINKYFKR  480
AMGNGKKWSE NEKRCPYFRE LDILYKKRLL NPEKPPDEMN DEGKERSANE EMLTTLAQVC  540
NLFSMSEPLE PVGGQSGSCL V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1359364ERRRRD
2360365RRRRDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.17e-40Trihelix family protein