PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA20249.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GATA
Protein Properties Length: 351aa    MW: 38743.7 Da    PI: 6.1831
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA20249.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.29.9e-18247281135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  OVA20249.1 247 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 281
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MEAPEFFHGG YSSCRTLNAQ FTPEKRHAAT DHKLSSGGAA DQFIIEDLLD FSNEDAILGD  60
GTFDCITTGN STDSASSVTF VDSSCNSSIS GNDPNFSGDF GSRDFPDAPF SNDLCVPYDD  120
LAELEWLSNF VEESFSSEDL QKLQLISGIQ TRNKEVSQTR EEFQPETNRN NPIFHPELPV  180
PGKARSKRSR AAPNNWSSRL LVLSPTTSSS ESDVASNSSK KTLKAISRKK EVSDGSTGSA  240
SGDGRKCLHC ATDKTPQWRT GPMGPKTLCN ACGVRYKSGR LVPEYRPAAS PTFVLAKHSN  300
SHRKVLELRR QKEMQMSQQQ QFLYPNQAFD VSNGDDYLIH HHTGPDFRQL I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.13e-81GATA family protein