PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA20288.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family bHLH
Protein Properties Length: 340aa    MW: 38971.8 Da    PI: 4.4527
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA20288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.11.3e-07221263855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  Er+RR+r+ + +  Lr l+P+      +K++K ++L  A  Y+k++q
  OVA20288.1 221 SERNRRKRLSQQLLALRALVPNI-----TKMDKRSVLVDALSYLKNMQ 263
                 6*********************7.....6****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MEGIDAYGFH QELNHQTSMN NPKTRILETI SSWLDLDLPN TPSFPQELQD LQMLDEHFFQ  60
FATTHMDSEP LPNLPRPDSP FILDLHEFDV NNPPPPNNSF TEKPTNTDCY QPAVPVPDEC  120
EMFLNVMAES PESIGGVDQF FQSDDHDDDQ NFNIMSNSSS STELDKINKK QKQQQQQQQP  180
QSSDPHHEST NTTNVDDDDD EDQEIEDEPK RGTLNCKNLV SERNRRKRLS QQLLALRALV  240
PNITKMDKRS VLVDALSYLK NMQEETARIQ KELKEQQHHH HQQQQQQLQH QPSGLLTETS  300
LDDDSPSANR IPRILATGGA SKPKPQILEG NEWSCRVRDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.37e-08bHLH family protein