PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20322.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

CPP

Protein Properties

Length: 544aa MW: 58845.2 Da PI: 7.894

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20322.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.9	1.1e-14	76	115	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g++C+ C+C +C+N+ e+ OVA20322.1 76 KQKQCNCKHSRCLKLYCECFASGVYCDG-CNCVNCSNNVEN 115 89************************.******9875 PP
2	TCR	51	2.8e-16	160	199	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e OVA20322.1 160 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 199 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MEQIDGGDFP PKKLARQLDF TAFSSISTAV VLPEHPQPLP PAPPPPPRPL LPVVKPESPR 60 SRPRPNLEVK DGTPKKQKQC NCKHSRCLKL YCECFASGVY CDGCNCVNCS NNVENEASRQ 120 EAVEATLERN PNAFRPKIAS SPHGTRDTRE EAGNAPMVGK HNKGCHCKKS GCLKKYCECF 180 QANILCSENC KCMDCKNFEG SEERRALFHG DHGNALYMQQ AAANAAITGA IGSSGYGSPP 240 TSRKRKNQEL FFGTAAKDPS IHRLAQFSQQ VNQQKASVSS SSLSSLPLPR VVNPAVFGSS 300 KFTYRSLLAD IVHTQDVKEL CSLLVVISGE AAKTLGDKNV TIENQAVREN QTESFLASSN 360 KDREDIQKEQ DVQKAVADDR SSGNQADKTG IDDSGSDGTD VQKGGRPMSP GTLALMCDEQ 420 DTMFMAAASP SGATLHSHNT PLPYGQDMTE VYAEQERLVL TGFRDCLRRI ITFGRIKEEK 480 YASSSGTRTE TWSQPEPVGN GNVRPPVVVP AAAGEISQAV TTVTVSSNNG LPLKVSDSAV 540 VKKL

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MEQIDGGDFP PKKLARQLDF TAFSSISTAV VLPEHPQPLP PAPPPPPRPL LPVVKPESPR  60
SRPRPNLEVK DGTPKKQKQC NCKHSRCLKL YCECFASGVY CDGCNCVNCS NNVENEASRQ  120
EAVEATLERN PNAFRPKIAS SPHGTRDTRE EAGNAPMVGK HNKGCHCKKS GCLKKYCECF  180
QANILCSENC KCMDCKNFEG SEERRALFHG DHGNALYMQQ AAANAAITGA IGSSGYGSPP  240
TSRKRKNQEL FFGTAAKDPS IHRLAQFSQQ VNQQKASVSS SSLSSLPLPR VVNPAVFGSS  300
KFTYRSLLAD IVHTQDVKEL CSLLVVISGE AAKTLGDKNV TIENQAVREN QTESFLASSN  360
KDREDIQKEQ DVQKAVADDR SSGNQADKTG IDDSGSDGTD VQKGGRPMSP GTLALMCDEQ  420
DTMFMAAASP SGATLHSHNT PLPYGQDMTE VYAEQERLVL TGFRDCLRRI ITFGRIKEEK  480
YASSSGTRTE TWSQPEPVGN GNVRPPVVVP AAAGEISQAV TTVTVSSNNG LPLKVSDSAV  540
VKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-143	CPP family protein