PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA20327.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family bHLH
Protein Properties Length: 274aa    MW: 31424 Da    PI: 9.6558
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA20327.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH383e-1296142755
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  +Er+RR+++ s ++ Lr++lP       ++K s ++   +Av+YIk+Lq
  OVA20327.1  96 DVERQRRQEMTSLYNSLRSILPLeY---IKGKRSVSDHMNEAVNYIKHLQ 142
                 68*********************77...*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MNNISSPYPL HQCRWNHEMS SSPEKQTINH QDIIQVNPFS NILEGCPDNL PIFKLDNKNK  60
AAACNSSDTT NNIPNRNHHN HRRVNENKMK MVLRRDVERQ RRQEMTSLYN SLRSILPLEY  120
IKGKRSVSDH MNEAVNYIKH LQKKIQEMKD KRDGLKRLFS YSNPSVIPRG VSYSQLDFVT  180
VQPCFCGFEV AISTSLSYGL LPLSRVLQAL LADGLTVSSC VSTRVNERSL HTILVEVSDL  240
RGINTMELQQ KLMDLIQYSS RNPMFAGTKS YVLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.12e-42bHLH family protein