PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20385.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SRS

Protein Properties

Length: 347aa MW: 38154.8 Da PI: 8.022

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	229.5	6.2e-71	120	274	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrel...kskkqsalss.tklssaesk 97 g++sCqdCGnqakkdC+h+RCRtCCksrg+ C+thvkstWvpa++rrerqqql+a+++++++++++++ + +re+ + ++ +al++ t++++a ++ OVA20385.1 120 GGGKSCQDCGNQAKKDCVHMRCRTCCKSRGYPCQTHVKSTWVPASRRRERQQQLQALQEQQQQQQQQQQMRGERENpkrQRENPNALACtTRIPTA-TT 217 5788**************************************************9999988886665555555443334444555550556655.56 PP DUF702 98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + le+ ++P+e++s+avfrcvrvs++dd++e++aYqtav+igGh+fkGiLydqG+++ OVA20385.1 218 SGLEVGNFPPELNSPAVFRCVRVSGIDDADEQYAYQTAVNIGGHLFKGILYDQGPDS 274 6999*************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MAGFSLGGGN QQNPPHEIHP DTLFLYRNEE ISSSYNNNNN NSNKGFELWQ HHHHHHHHHL 60 QRQQQQQQQH HYQLQQNAYS LEVGPSRSTN ASDESSSRAL TMMMRQSGGG GGEGGSGGGG 120 GGKSCQDCGN QAKKDCVHMR CRTCCKSRGY PCQTHVKSTW VPASRRRERQ QQLQALQEQQ 180 QQQQQQQQMR GERENPKRQR ENPNALACTT RIPTATTSGL EVGNFPPELN SPAVFRCVRV 240 SGIDDADEQY AYQTAVNIGG HLFKGILYDQ GPDSHYVHGE SSSGGGGGGI HQRNLITDAA 300 TTTNTTVVSS AAAAALIDPS SLYPTPLNAF MAEAKLAADD DMRRNKK

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MAGFSLGGGN QQNPPHEIHP DTLFLYRNEE ISSSYNNNNN NSNKGFELWQ HHHHHHHHHL  60
QRQQQQQQQH HYQLQQNAYS LEVGPSRSTN ASDESSSRAL TMMMRQSGGG GGEGGSGGGG  120
GGKSCQDCGN QAKKDCVHMR CRTCCKSRGY PCQTHVKSTW VPASRRRERQ QQLQALQEQQ  180
QQQQQQQQMR GERENPKRQR ENPNALACTT RIPTATTSGL EVGNFPPELN SPAVFRCVRV  240
SGIDDADEQY AYQTAVNIGG HLFKGILYDQ GPDSHYVHGE SSSGGGGGGI HQRNLITDAA  300
TTTNTTVVSS AAAAALIDPS SLYPTPLNAF MAEAKLAADD DMRRNKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	5e-56	SRS family protein