PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20392.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

DBB

Protein Properties

Length: 325aa MW: 35686.1 Da PI: 7.9991

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.8	4e-07	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +++ e++ fC ++ lC+ C H+ H+ OVA20392.1 4 QCDVCNRDEASVFCSADEAALCDGCDRRVHHAnklaskHK 43 7****99*****************964447777776 PP
2	zf-B_box	32.5	1.8e-10	56	97	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++++C+ ++ek++ lfC++++ lC+dC l++H H OVA20392.1 56 DAPRCDICQEKRAFLFCREDRAILCRDCDLSIHTAneltkkH 97 679******************************545555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MKIQCDVCNR DEASVFCSAD EAALCDGCDR RVHHANKLAS KHKRFSLLHP SSSPSDAPRC 60 DICQEKRAFL FCREDRAILC RDCDLSIHTA NELTKKHNRF LLTGVKLSST SAIFSSPNTT 120 STTTTITSSS DSKTTMTVTT KTRPSNVSPV PGLHYPPPSI QTNTTSSSTP SKICDPFDQT 180 ITTSVGGSTS SISEYLMETL PGWQVEDLLL LDSSSSSPTT ITTHGHHNGL CKNEDLLPFL 240 DADFHLDQTS NLGCFVSEAP IRAPYNPPPP IDNRKNNGLM FKEQVNMMSN PIKSSSKGIN 300 KRRSDHGFTV PQISPPSNKR SRPLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	1e-65	DBB family protein