PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20415.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

DBB

Protein Properties

Length: 210aa MW: 23279.3 Da PI: 6.2948

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.8	1.7e-06	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e ++lfC ++ lC C ++ H OVA20415.1 4 LCDVCEGAAATLFCAADEAALCVPCDEKVH 33 7****99****************998 PP
2	zf-B_box	27	9.1e-09	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++Ce +++ lC +C + H g H OVA20415.1 52 DVPRCDICENAPAFFYCEIDGTSLCLQCDMVVHVGgkrtH 91 5799**************************9996544455 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MRTLCDVCEG AAATLFCAAD EAALCVPCDE KVHLCNKLAS RHIRVGLADP SDVPRCDICE 60 NAPAFFYCEI DGTSLCLQCD MVVHVGGKRT HARYLLLRQR AEFPVDRSTH SEDQALQPMD 120 PGENRWKQNQ PPNTTMKENL QNHRVFPAPM PDAKDDNHRK MDIKMIDLNT KPNRMNGQAS 180 SNQGMDGLSG SNLESASVVP VGSFEREHGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	6e-80	DBB family protein