PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA20447.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family FAR1
Protein Properties Length: 106aa    MW: 12213.8 Da    PI: 8.7189
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA20447.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR141.15.9e-13341042990
        FAR1  29 tkrtfvCske.gkreeekkk.......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                 +++ + C++  g+r   +++       t+k+r ++++ rt+Cka+l++ ++   g+w v+++++eHnH+l 
  OVA20447.1  34 IEEAYECYQDyGRRMGMHRTksdtsdgTKKKRINTSTMRTNCKARLRIALDPkLGEWFVKSFVEEHNHALL 104
                 556677765313332222224455777899999******************989***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MSTSENIEPI DKIQDIDSNK KSRIPSLGTT FSSIEEAYEC YQDYGRRMGM HRTKSDTSDG  60
TKKKRINTST MRTNCKARLR IALDPKLGEW FVKSFVEEHN HALLEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.13e-07FAR1 family protein