PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20496.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 414aa MW: 47198.3 Da PI: 8.1658

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.8	2.5e-13	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G ++W+t+++ g+ R++k+c++rw +yl OVA20496.1 14 RGPWTIEEDHKLMNFILNNGIHCWRTVPKLAGLMRCGKSCRLRWINYL 61 89********************************************97 PP
2	Myb_DNA-binding	54.5	2.7e-17	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+ E+ ++++++ +lG++ W++Ia+ ++ gRt++++k++w++ OVA20496.1 67 RGAFTEMEENQIIQLHSRLGNR-WSKIAANFP-GRTDNEIKNHWNT 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MGRQPCCEKI GLKRGPWTIE EDHKLMNFIL NNGIHCWRTV PKLAGLMRCG KSCRLRWINY 60 LRPDLKRGAF TEMEENQIIQ LHSRLGNRWS KIAANFPGRT DNEIKNHWNT RIKKRLKQLG 120 LDPVTHKPIE HSGKCETSKD DEQNLDVEQV DIPISEDDFP VITQKKEDEF EFGSSGDDDT 180 NCINLLFHQS HEMLWNNYGG FDMGSASLMN NKPIMTTNNC SSSFSLEDSS LNNNNNNPSV 240 NNNGEISSSS LQQEEYSDQP ATTNCWIDTS SRADLGFAMY ALQRALRSIH TTVQPPRLTK 300 LSLQPPKAVE VEFADGSVFN LSAEFLRVHS PAVDSKIRSV GGEKVIYGRR HVGIMSAEPV 360 GNYGIRIAFD DLHKTGIYTW DYFYHLGSNK FTLMKNYIKT LKKHGLSRDP QRRK

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MGRQPCCEKI GLKRGPWTIE EDHKLMNFIL NNGIHCWRTV PKLAGLMRCG KSCRLRWINY  60
LRPDLKRGAF TEMEENQIIQ LHSRLGNRWS KIAANFPGRT DNEIKNHWNT RIKKRLKQLG  120
LDPVTHKPIE HSGKCETSKD DEQNLDVEQV DIPISEDDFP VITQKKEDEF EFGSSGDDDT  180
NCINLLFHQS HEMLWNNYGG FDMGSASLMN NKPIMTTNNC SSSFSLEDSS LNNNNNNPSV  240
NNNGEISSSS LQQEEYSDQP ATTNCWIDTS SRADLGFAMY ALQRALRSIH TTVQPPRLTK  300
LSLQPPKAVE VEFADGSVFN LSAEFLRVHS PAVDSKIRSV GGEKVIYGRR HVGIMSAEPV  360
GNYGIRIAFD DLHKTGIYTW DYFYHLGSNK FTLMKNYIKT LKKHGLSRDP QRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14340.1	8e-81	MYB family protein