PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20517.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 1364aa MW: 151413 Da PI: 8.7836

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20517.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00086	1249	1274	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C C++ Fs+k +L+ H ++ + OVA20517.1 1249 YQCDmdGCTMGFSSKQELQLHKKNtC 1274 99*******************99866 PP
2	zf-C2H2	11.5	0.00094	1273	1296	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 +C+ Cgk F ++ +L++H r+H OVA20517.1 1273 TCSvkGCGKKFFSHKYLVQHRRVH 1296 588889****************99 PP
3	zf-C2H2	11.9	0.00068	1332	1358	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H OVA20517.1 1332 YVCRepGCGQTFRFVSDFSRHKRKtgH 1358 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1364 aa Download sequence
MATTVPVVVA EPHPEIPLWL KTLPLAPEYH PTLEEFQDPI SYILKIEKEA SKYGICKIIP 60 PVPPPPKKTA ITNLNRSLAA RTPNPNTKSP PTFTTRHQQI GFCPRKPRPV QRPVWQSGEA 120 YTLQQFEAKA KQFEKTYLKK AGKKGFSALE IETLFWKASV DKPFTVEYAN DMPGSAFVPI 180 NEKKWREAGE AATVGETLWN MRGVSRAKGS LLRFMKEEIP GVTSPMVYIA MMFSWFAWHV 240 EDHDLHSLNY LHMGAGKTWY GVPREAAVAF EEVIRVHGYG GEVNPLVTFA TLGEKTTVMS 300 PEVLIGVGIP CCRLVQNVGE FVVTFPRAYH SGFSHGFNCG EAANIATPEW LMVAKEAAIR 360 RASINYPPMV SHLQLLYALA LTLCSSVPMS ISNEPRSSRL KDKKRGEGQT MIKELFVQNM 420 MQNNDQLHFL FEQGASCVLL PKDSSEMSLC SNLRVGSQAK VKPRLSLGLR SNRDALEASK 480 VLVSDDIMLD RNVRVGPSSG FCSMKGKSSS VFEGDRLSFS SRGNGPFGNA DLCTSTSVSA 540 DVGTDKESTS QGRRLLEQGL FSCVTCGILS FACAAVIHPK DDAARYLMSA DCGFLNDWGV 600 GSGVANDRYS IADRNDDNLE INHCSGQIEK SDQDGLYDVP VQSGDYQIQV ADRRVEVVPE 660 IGVPDKRVEP VSDTGAKKGV SSLDLLAFAY GNSSESEDGS ADECDRGDCS PLDQRSGFQS 720 DDSGSHSLER NYQGGTVESI SHPSPRLGNG NDSSARISRG ISASYRRQRW RSYNVKVKGQ 780 EALDSSVEND MKRLVCMESI ADKGSSRNAM VISGRTVAGS ADVHRSDLKM EGIDSGPPDY 840 SMPSTSSCDV PITSSGPLFG ETSKCTNVEL PIKNPNMSLM QKSDEDSTRK HIFCLEHAVE 900 VEKQLRPIGG VDMLLLCNPE YPKVQAEAKS LAEEMGVDHI WKGIPFKEAS KEDIERIRSA 960 LDDEEAIPGN GDWSVKLGIN LYYSASLSQS PLYSKQMPYN SVIYKAFGRS SPVFSPTKPE 1020 VSSKGLSKQK KIVVAGKWCG KVWMTNQVHP YLAHRENQEE DHSITFHART IRDLKLERKP 1080 NMGHLTEQLL VPKKNFTPGT ATTIDRKPTQ KRKRTSEKRA IKRPRSPQLD SPVEVEVEVE 1140 AAEEDPENDS PPRCGRILRS GQMKHETPRL RRSSSRSIRR YDSLMKDEVE EGGPSTRLRR 1200 RTTSKPAEEV VVKGKGKSEG EKKAKKKKAK KASASGNDEE TLKDAEAEYQ CDMDGCTMGF 1260 SSKQELQLHK KNTCSVKGCG KKFFSHKYLV QHRRVHTDDR PLKCPWKGCK MTFKWAWART 1320 EHIRVHTGAR PYVCREPGCG QTFRFVSDFS RHKRKTGHSV KGRG

Sequence ? help Back to Top

Protein Sequence Length: 1364 aa Download sequence

MATTVPVVVA EPHPEIPLWL KTLPLAPEYH PTLEEFQDPI SYILKIEKEA SKYGICKIIP  60
PVPPPPKKTA ITNLNRSLAA RTPNPNTKSP PTFTTRHQQI GFCPRKPRPV QRPVWQSGEA  120
YTLQQFEAKA KQFEKTYLKK AGKKGFSALE IETLFWKASV DKPFTVEYAN DMPGSAFVPI  180
NEKKWREAGE AATVGETLWN MRGVSRAKGS LLRFMKEEIP GVTSPMVYIA MMFSWFAWHV  240
EDHDLHSLNY LHMGAGKTWY GVPREAAVAF EEVIRVHGYG GEVNPLVTFA TLGEKTTVMS  300
PEVLIGVGIP CCRLVQNVGE FVVTFPRAYH SGFSHGFNCG EAANIATPEW LMVAKEAAIR  360
RASINYPPMV SHLQLLYALA LTLCSSVPMS ISNEPRSSRL KDKKRGEGQT MIKELFVQNM  420
MQNNDQLHFL FEQGASCVLL PKDSSEMSLC SNLRVGSQAK VKPRLSLGLR SNRDALEASK  480
VLVSDDIMLD RNVRVGPSSG FCSMKGKSSS VFEGDRLSFS SRGNGPFGNA DLCTSTSVSA  540
DVGTDKESTS QGRRLLEQGL FSCVTCGILS FACAAVIHPK DDAARYLMSA DCGFLNDWGV  600
GSGVANDRYS IADRNDDNLE INHCSGQIEK SDQDGLYDVP VQSGDYQIQV ADRRVEVVPE  660
IGVPDKRVEP VSDTGAKKGV SSLDLLAFAY GNSSESEDGS ADECDRGDCS PLDQRSGFQS  720
DDSGSHSLER NYQGGTVESI SHPSPRLGNG NDSSARISRG ISASYRRQRW RSYNVKVKGQ  780
EALDSSVEND MKRLVCMESI ADKGSSRNAM VISGRTVAGS ADVHRSDLKM EGIDSGPPDY  840
SMPSTSSCDV PITSSGPLFG ETSKCTNVEL PIKNPNMSLM QKSDEDSTRK HIFCLEHAVE  900
VEKQLRPIGG VDMLLLCNPE YPKVQAEAKS LAEEMGVDHI WKGIPFKEAS KEDIERIRSA  960
LDDEEAIPGN GDWSVKLGIN LYYSASLSQS PLYSKQMPYN SVIYKAFGRS SPVFSPTKPE  1020
VSSKGLSKQK KIVVAGKWCG KVWMTNQVHP YLAHRENQEE DHSITFHART IRDLKLERKP  1080
NMGHLTEQLL VPKKNFTPGT ATTIDRKPTQ KRKRTSEKRA IKRPRSPQLD SPVEVEVEVE  1140
AAEEDPENDS PPRCGRILRS GQMKHETPRL RRSSSRSIRR YDSLMKDEVE EGGPSTRLRR  1200
RTTSKPAEEV VVKGKGKSEG EKKAKKKKAK KASASGNDEE TLKDAEAEYQ CDMDGCTMGF  1260
SSKQELQLHK KNTCSVKGCG KKFFSHKYLV QHRRVHTDDR PLKCPWKGCK MTFKWAWART  1320
EHIRVHTGAR PYVCREPGCG QTFRFVSDFS RHKRKTGHSV KGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein