PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20674.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NF-YC

Protein Properties

Length: 255aa MW: 28423.3 Da PI: 4.4889

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	37.8	4e-12	1	69	30	98
NF-YC 30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 ++adedv +i+ +P l+ska elf+ +l r++ + + +t++ ++++v++ ++fdfl +iv + OVA20674.1 1 MQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYDITLQRGAKTMNSLHLKQCVQSFNVFDFLREIVSK 69 899**************************************************************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MQADEDVGKI AMAVPLLVSK ALELFLQDLC DRTYDITLQR GAKTMNSLHL KQCVQSFNVF 60 DFLREIVSKV PDLGGSDAAG DDRCVPKRRK AADDEDHDSD EEAKRTRMHE MGHGSSSGRG 120 RGRGRGRGRG RGNRAIERES TQPDKCEDDP DMSPPQDKQK MNPERLDNGE EAKESKESMI 180 LGTSSNSMLR NFDLNVGLQD GDTAAQPISK DPPETKHEEY PGWSLSDVDK MAIDPLQLAQ 240 LNQKIDEDED YDEEG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	128	RGRGRGRGRG
2	119	129	RGRGRGRGRGR
3	121	130	RGRGRGRGRG
4	121	131	RGRGRGRGRGR
5	123	132	RGRGRGRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G19490.1	2e-51	NF-YC family protein