PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20785.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

LBD

Protein Properties

Length: 181aa MW: 19729.2 Da PI: 6.2275

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	142.8	1.1e-44	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+kll++lp+++reda++sl+yeAear++dPvyG+vg i+ lq+q++ql++el+++++ OVA20785.1 7 PCAACKFLRRKCLSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELPTHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQKQVHQLQEELDAANA 105 7*********************************************************************************************99886 PP DUF260 100 e 100 + OVA20785.1 106 N 106 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MASSNSPCAA CKFLRRKCLS GCIFAPYFPP EEPQKFANVH KIFGASNVTK LLNELPTHQR 60 EDAVNSLAYE AEARIKDPVY GCVGAISVLQ KQVHQLQEEL DAANANLIRY ACTESSAALP 120 VSRSRSSSSM ELNRRMGIDH QGGSFYDQSA SSLHLPYLPP PWPDNLSGDM HDMGGGDEGS 180 L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	1e-68	LBD family protein