PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20812.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NAC

Protein Properties

Length: 398aa MW: 44759.2 Da PI: 5.0522

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	102.6	5.2e-32	55	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksg 81 lp G++F+P+d el+ e+L+ kv+ + + +e+i++++ i++++P++Lp +k++ ++++fF++++k+yatg rk+r+ ++ OVA20812.1 55 LPIGVKFDPSDVELL-EHLAGKVALGNskphifI--DEFIPTLEadegICYTHPENLP-GAKKDGSSVHFFHRTSKAYATGPRKRRKihgqcsstEEHV 149 699**********.899999887775666432..333433322244******.55677899***************8678877744488 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+k+v++ +g ++g+kk+Lv+y +++ +k+ k++Wvmh+y+l OVA20812.1 150 RWHKTGKTKPVIE-NGIQKGCKKILVLYksSKKGSKPDKSNWVMHQYHL 197 9********.99********4434666778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MARSWLIDSR GIANKVKNAS HFSSYQIKDC GASRECPNCH HRIDNSDVSV EWPGLPIGVK 60 FDPSDVELLE HLAGKVALGN SKPHIFIDEF IPTLEADEGI CYTHPENLPG AKKDGSSVHF 120 FHRTSKAYAT GPRKRRKIHG QCSSTEEHVR WHKTGKTKPV IENGIQKGCK KILVLYKSSK 180 KGSKPDKSNW VMHQYHLGTK EEEIEGEFVV SKIFYQQQPK HMDKSEMDSI PIIEEYAMLG 240 VQASPSTPKT NTPNLPRPEK RAKLDQVDKE NAQDAEFISE APQLPPEPVH LGDEKLDPVW 300 WAGESQAVDD PDLDGMDTSL LCDEILDSYA HFDESELKQV PYFSDFGQNR NDMFEGDMNE 360 PCGISDLGNL ALETPPDFEL ADLQFGSQES IMGWLDRL

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MARSWLIDSR GIANKVKNAS HFSSYQIKDC GASRECPNCH HRIDNSDVSV EWPGLPIGVK  60
FDPSDVELLE HLAGKVALGN SKPHIFIDEF IPTLEADEGI CYTHPENLPG AKKDGSSVHF  120
FHRTSKAYAT GPRKRRKIHG QCSSTEEHVR WHKTGKTKPV IENGIQKGCK KILVLYKSSK  180
KGSKPDKSNW VMHQYHLGTK EEEIEGEFVV SKIFYQQQPK HMDKSEMDSI PIIEEYAMLG  240
VQASPSTPKT NTPNLPRPEK RAKLDQVDKE NAQDAEFISE APQLPPEPVH LGDEKLDPVW  300
WAGESQAVDD PDLDGMDTSL LCDEILDSYA HFDESELKQV PYFSDFGQNR NDMFEGDMNE  360
PCGISDLGNL ALETPPDFEL ADLQFGSQES IMGWLDRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	7e-94	NAC family protein