PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA20867.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB_related

Protein Properties

Length: 759aa MW: 84185.7 Da PI: 10.085

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA20867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.5	4.6e-11	9	44	1	37
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37 + W t+E++ll++avk++G+++W+++a +++ +R+ OVA20867.1 9 KETWGTWEELLLACAVKRHGTKNWESVAMEIQ-NRSS 44 578*****************************.9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
MAKTEETKKE TWGTWEELLL ACAVKRHGTK NWESVAMEIQ NRSSSSTNFL VTPQNCKQKY 60 LDLHHRFMVK DDKIVDSEDK SETDHNKDDN KIPWLDELRQ LRVAELRREV QQYDVSIVSL 120 QLKVNRLKEE RELSLREKES ADVKPDLKDE RTEDEKKNGE GEPERTSPAD DTGKPASGDD 180 SDRDNQSFNE SNSTDLKGEN REVGVENGEK KPEPVQTATD KPDPVFKDSP VDKPVGEGSY 240 NGSSETIAKD SVVPAVKKSS ETIPVREGRE SAELWESVAE SKGGGEEGTA KESSDVQSSA 300 SLSRRNRRRK IISGSSSGEE RETDEVSPAI KRISVKSQPL VGFLEMIQSH KFGSVFDSRL 360 ESQETTKYRS LIRQHIDLET IQTRLKEGRY SGCSRKFFRD LLLLFNNAIV FFPKNSSESV 420 AAIELRELVT KELSSRSSRN QNQPPEEPTP PTTTAPPPQQ APTPPPPPPP SVPKPEPEPS 480 DSLLPKSKSS GPIIACRKRS SISAKASNST APVEKKGSGS DQKVEEKEKP PVVDRKQTDN 540 SSAAEQSLLS KRKGERSASG TRSSRSSSKN RNNNNNTNNN SKNSNSNQNP GPSSNRSSSA 600 KGNDDNNSES KTEKEKEKEK EKEKKSNSVA TTTTGVGKKR SVANFLNRMK RNSSSSNNGT 660 LLETLKSSTT NNSSNNKRER GGENKEEKKG GGGRKDHQTR QSSSGRQSQA AQESSPAKRS 720 VGRPPKRAPP PPLPPPSKRT RERETVEPEA RQPRKRTRR

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

MAKTEETKKE TWGTWEELLL ACAVKRHGTK NWESVAMEIQ NRSSSSTNFL VTPQNCKQKY  60
LDLHHRFMVK DDKIVDSEDK SETDHNKDDN KIPWLDELRQ LRVAELRREV QQYDVSIVSL  120
QLKVNRLKEE RELSLREKES ADVKPDLKDE RTEDEKKNGE GEPERTSPAD DTGKPASGDD  180
SDRDNQSFNE SNSTDLKGEN REVGVENGEK KPEPVQTATD KPDPVFKDSP VDKPVGEGSY  240
NGSSETIAKD SVVPAVKKSS ETIPVREGRE SAELWESVAE SKGGGEEGTA KESSDVQSSA  300
SLSRRNRRRK IISGSSSGEE RETDEVSPAI KRISVKSQPL VGFLEMIQSH KFGSVFDSRL  360
ESQETTKYRS LIRQHIDLET IQTRLKEGRY SGCSRKFFRD LLLLFNNAIV FFPKNSSESV  420
AAIELRELVT KELSSRSSRN QNQPPEEPTP PTTTAPPPQQ APTPPPPPPP SVPKPEPEPS  480
DSLLPKSKSS GPIIACRKRS SISAKASNST APVEKKGSGS DQKVEEKEKP PVVDRKQTDN  540
SSAAEQSLLS KRKGERSASG TRSSRSSSKN RNNNNNTNNN SKNSNSNQNP GPSSNRSSSA  600
KGNDDNNSES KTEKEKEKEK EKEKKSNSVA TTTTGVGKKR SVANFLNRMK RNSSSSNNGT  660
LLETLKSSTT NNSSNNKRER GGENKEEKKG GGGRKDHQTR QSSSGRQSQA AQESSPAKRS  720
VGRPPKRAPP PPLPPPSKRT RERETVEPEA RQPRKRTRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	304	309	RRNRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	2e-69	MYB_related family protein