PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM62575.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C3H
Protein Properties Length: 162aa    MW: 18106.7 Da    PI: 11.0323
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM62575.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.91.7e-08139159223
                 -S---SGGGGTS--TTTTT-SS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkF 23 
                 k+ lCr+f + G C++Gd+CkF
  OWM62575.1 139 KRQLCRHFNK-GMCHFGDNCKF 159
                 899*******.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MKKKEKVNCA RSGSTFTMKN NTVRAPKAGP FVTNSDLRIP PIALGLVRNR AVHAHGPQVP  60
IILQHPQGGQ DQHHHAAWKN PGISQSFPGR KQVLRHNYLG SPTLCPSNSA HIQNRDGHPL  120
ANVNQYPRIG TQGRAESHKR QLCRHFNKGM CHFGDNCKFL YE