PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM62663.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ZF-HD
Protein Properties Length: 190aa    MW: 20364.5 Da    PI: 8.3866
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM62663.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer91.67e-29561359
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                 + +Y+eCl+NhAaslG++a+DGCgEf+ ++++++   +l+CaACgCHRnFHR+ +++
   OWM62663.1  5 REVYRECLRNHAASLGSYATDGCGEFTLDDSSSSPGGSLHCAACGCHRNFHRKVTTY 61
                 568**************************88889999****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MEGEREVYRE CLRNHAASLG SYATDGCGEF TLDDSSSSPG GSLHCAACGC HRNFHRKVTT  60
YAAAAANEGG GGGGRGLLVA APGAFSSRRG DQHLELVVTA AESPSESDRS GGGGSKKRFR  120
TKFTPEQKEK MLEFAEKLGW KLQRKDLEDE IERFCRSVGV SRQVFKVWMH NHKNSSSSSA  180
STGNASSLTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-34ZF-HD family protein