PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM62670.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 390aa MW: 42937.5 Da PI: 7.8205

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM62670.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.4e-32	227	280	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ OWM62670.1 227 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 280 9****************************************************7 PP
2	Myb_DNA-binding	48.8	1.6e-15	228	279	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ OWM62670.1 228 RMRWTTSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 279 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MLRGGNFRER FTDTIPIPDL SLHISPPNST PSSTSTERDS STNFDIWGRF DSLNGCALKS 60 PHSDGSTVKE ADTELSLASN SFPSSHLEAE SPWRSSEEHD IDGFFKKRNM SRHGIDSLLG 120 VSDKLQPIIG TPVYNSNNTA SCSNTWFPFS PPSPADYNGY FPKAYPAFAN PTTGPRLGNG 180 MRLMENIIKS QQQLQYYGGG GNLDFSSNSR LKFMPKPQNN RRNMRAPRMR WTTSLHARFV 240 HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKNTDKAAAS SDGSGDDDFL 300 PPAKSVPPNG TYSLPNQRGA SNGSLEHNNT GYSSVNMWSN SSREGDPMKL RAETLTSLRQ 360 SEEDDSFHQP KFIGGSNRGI GSGPSLEFSL

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MLRGGNFRER FTDTIPIPDL SLHISPPNST PSSTSTERDS STNFDIWGRF DSLNGCALKS  60
PHSDGSTVKE ADTELSLASN SFPSSHLEAE SPWRSSEEHD IDGFFKKRNM SRHGIDSLLG  120
VSDKLQPIIG TPVYNSNNTA SCSNTWFPFS PPSPADYNGY FPKAYPAFAN PTTGPRLGNG  180
MRLMENIIKS QQQLQYYGGG GNLDFSSNSR LKFMPKPQNN RRNMRAPRMR WTTSLHARFV  240
HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKNTDKAAAS SDGSGDDDFL  300
PPAKSVPPNG TYSLPNQRGA SNGSLEHNNT GYSSVNMWSN SSREGDPMKL RAETLTSLRQ  360
SEEDDSFHQP KFIGGSNRGI GSGPSLEFSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-32	G2-like family protein