PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM62706.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 340aa    MW: 35825.4 Da    PI: 7.6634
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM62706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.33.1e-07253296443
                      S-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksr 43 
                      WT+eE+ +l++++k++G       + ++Iar ++ g+t  ++ +r
       OWM62706.1 253 WTPEEQRQLIELCKMYGHIecpvsRLAKIARPFP-GKTMRDVALR 296
                      *****************77***************.***9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MAGDQSSPWA QRGAAFPHPA PQLLPHCHSA KPFHSSPLIS GDGPAFLPPW AAAPDPSFPG  60
DLPLELPTEP LYDLQKITGG GQGFYPRGLG DFHPPELGVI PSSSSSAPYN GHMAISSFGP  120
SAALPPDAPF GGGTLPSEPA AGRFGNPLLS SSAGGAADFS LSGFQEFPRY SSAVPFGSTP  180
AISSNGPTAP PPAPSGFCPT SGQELPYYSA GERLINNPPA ISGNGPTGPA TAAVGASQAE  240
PSEMKNIDLS LIWTPEEQRQ LIELCKMYGH IECPVSRLAK IARPFPGKTM RDVALRIRWM  300
EEKRNQRTKA VNSSRLHRGM KVTVRSRDHL HLSSQPGVPY