PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM62736.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family FAR1
Protein Properties Length: 236aa    MW: 26245 Da    PI: 8.4983
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM62736.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.33.9e-2195193190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek.....dgkwevtkleleHnHela 90 
                 kfY eYA+++GF vr+   ++s+++g++ + ++ C+keg++++ ++     ++k+r++ a+ r gC+a + vk+e+      + w+v+++++eH H+l 
  OWM62736.1  95 KFYTEYARRAGFAVRVLDRQRSSTDGRTLSLRLGCNKEGFKRPGRRGsdgvENKKRNRGASFREGCNAAILVKRERaekrgVEMWMVARFVKEHCHPLL 193
                 6*****************************************99888899999999999**************99865444567*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MHHQVVPELI AEISGTGTVS AVRLRSRSLD AIKFLPRLNA ESKCLSFDWP SLVSVDLNEE  60
AMETVAEEQK IEPGEGDVWE PCVGMVFESE DAARKFYTEY ARRAGFAVRV LDRQRSSTDG  120
RTLSLRLGCN KEGFKRPGRR GSDGVENKKR NRGASFREGC NAAILVKRER AEKRGVEMWM  180
VARFVKEHCH PLLASTNGFS TTPVVSFVSM PLISVSSCLL LDFGNCLSAA FILRNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.23e-30FAR1 family protein