PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM62798.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 765aa MW: 84345.9 Da PI: 5.8406

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM62798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	64.5	1.7e-20	625	721	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ +++ed ++r W++++++ ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ +++++++ OWM62798.1 625 QKVLKQSDVGNLGRIVLPKKEAETHlpELEARDGISISMEDiGTSRIWNMRYRFwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvKCGKYLI 720 79***********************999999****7778***99777777777777.******************..5559998877 PP E CS B3 95 k 95 + OWM62798.1 721 R 721 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 765 aa Download sequence
MEQFYGEEMD PGVVVPRFDP MDVQEEDQAG SIDHHGLLDD GPMSFYASDF PPLPDFPCMS 60 SSSSSSSTGA PVKATPSSSS STASSSSTSA ASWAVLRSDQ DVDRSPPVQQ SPAMLPAAAT 120 LTSALSSTAS MDMILRDSKL EDTINCKEDE EAEVALEDCL DVMETFGYMD LLECNDLFDP 180 TSMFQNEEPT DPTAGAYPVE EFQVQHQLPQ EQPEQNFQRP EGADSHGPLT SAAQPYGEEQ 240 QPPAVVVKEG TDEMGQVLLE WLRTNRDSIS AEDLRRVKIK KATIEAAARR LGGGKAAMKQ 300 LLKLILEWVQ TNHLHRKRKE DEAQNKLHYP PLQDLPDPGT FPNPNPNMLN PSANSFTPEL 360 ASCFPSQPQW AASPYMTDHS GPVMAAPPPF ASSTVGYNMG GDPFSSSGDL YPGPPGLAEY 420 HMLDSPQSWP LPQYGAMPNY NFMAADVNFQ PPGAQAFIGY RNNSQYSNFP QQYYNSGNGE 480 RSLIRLGSSA TKEARKKRMA RQRRLMSHHH HRSINGHHNS HHANHQNGHH QAVMAMDHQQ 540 HARVGVCDQP GAAAANSGNW VYWPAAAPAV ATPAPPPMMS PEAMQAHQPV ERQPAMQGQS 600 GQRGQVAPDR RPGWKPENNL KFLLQKVLKQ SDVGNLGRIV LPKKEAETHL PELEARDGIS 660 ISMEDIGTSR IWNMRYRFWP NNKSRMYLLE NTGDFVRANG LQEGDFIVIY SDVKCGKYLI 720 RGVKVRQPEG EAKSNAKKPE NSKPQRNSNL QGSYSTTANN ASQRK

Sequence ? help Back to Top

Protein Sequence Length: 765 aa Download sequence

MEQFYGEEMD PGVVVPRFDP MDVQEEDQAG SIDHHGLLDD GPMSFYASDF PPLPDFPCMS  60
SSSSSSSTGA PVKATPSSSS STASSSSTSA ASWAVLRSDQ DVDRSPPVQQ SPAMLPAAAT  120
LTSALSSTAS MDMILRDSKL EDTINCKEDE EAEVALEDCL DVMETFGYMD LLECNDLFDP  180
TSMFQNEEPT DPTAGAYPVE EFQVQHQLPQ EQPEQNFQRP EGADSHGPLT SAAQPYGEEQ  240
QPPAVVVKEG TDEMGQVLLE WLRTNRDSIS AEDLRRVKIK KATIEAAARR LGGGKAAMKQ  300
LLKLILEWVQ TNHLHRKRKE DEAQNKLHYP PLQDLPDPGT FPNPNPNMLN PSANSFTPEL  360
ASCFPSQPQW AASPYMTDHS GPVMAAPPPF ASSTVGYNMG GDPFSSSGDL YPGPPGLAEY  420
HMLDSPQSWP LPQYGAMPNY NFMAADVNFQ PPGAQAFIGY RNNSQYSNFP QQYYNSGNGE  480
RSLIRLGSSA TKEARKKRMA RQRRLMSHHH HRSINGHHNS HHANHQNGHH QAVMAMDHQQ  540
HARVGVCDQP GAAAANSGNW VYWPAAAPAV ATPAPPPMMS PEAMQAHQPV ERQPAMQGQS  600
GQRGQVAPDR RPGWKPENNL KFLLQKVLKQ SDVGNLGRIV LPKKEAETHL PELEARDGIS  660
ISMEDIGTSR IWNMRYRFWP NNKSRMYLLE NTGDFVRANG LQEGDFIVIY SDVKCGKYLI  720
RGVKVRQPEG EAKSNAKKPE NSKPQRNSNL QGSYSTTANN ASQRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-125	B3 family protein