PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM62837.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 285aa MW: 32723.4 Da PI: 5.0548

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM62837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.5	1.4e-17	27	74	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd l ++v G g+W+++ar g++Rt+k+c++rw++yl OWM62837.1 27 KGPWTAEEDAVLMNYVSINGEGRWNSVARFAGLKRTGKSCRLRWLNYL 74 79********************************************97 PP
2	Myb_DNA-binding	48.1	2.7e-15	80	123	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ OWM62837.1 80 RGSITLQEQLLILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 123 78889***************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MEVRVARCFS PETSDVNEDE FIMDVKKGPW TAEEDAVLMN YVSINGEGRW NSVARFAGLK 60 RTGKSCRLRW LNYLRPDLRR GSITLQEQLL ILELHSRWGN RWSKIAQYLP GRTDNEIKNY 120 WRTRVQKQAK QLKCDVNSKQ FRDTMQYVWM PRLREQIQSL SGNTSSAQPT DAATNAVDPT 180 SNHTCDRNII YQMGQTASRS STFTSSFITE IPAASSDSNS DNTQASLVSD SSDHYGPREG 240 SSMDNIFDVS FSRPENLLDC SGDLMMENMW NEENIWFLQQ QLLDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47190.1	8e-78	MYB family protein