PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM62858.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 56aa    MW: 6395.42 Da    PI: 8.974
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM62858.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.41.4e-121446133
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgk 33
                     +g W++eEde+l+++++++G g+W+++++  gk
       OWM62858.1 14 KGLWSPEEDEKLLNYITKYGHGCWSSVPKLAGK 46
                     678****************************93 PP
Sequence ? help Back to Top
Protein Sequence    Length: 56 aa     Download sequence    
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KYGHGCWSSV PKLAGKLANL SSIHEC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.17e-28MYB family protein