PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM62950.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 183aa    MW: 20843 Da    PI: 5.7559
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM62950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.19e-10129164139
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-ST CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKls 39 
                 +r +h ++Er+RR+++N+ ++ +r+l+P++   +++++s
  OWM62950.1 129 QRITHIAVERNRRKQMNEYLSVIRSLMPTS---YAQRVS 164
                 799**************************8...666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MYRERERTAL LGYGGNELCC SMDDDWGFDQ RTYEEEQGDT NNGCFGFPGN QAAGCFYGQW  60
NCDELEFQLS NTSTSGSTPH AAAAAADYSQ RLDQDESKAV IDSDCGPSRR RRVKGRGKKQ  120
QQQEDIENQR ITHIAVERNR RKQMNEYLSV IRSLMPTSYA QRVSLSLCEN FQTCPAFLKH  180
KNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.12e-18bHLH family protein