PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM63090.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 369aa    MW: 41049.5 Da    PI: 4.4959
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM63090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.32.9e-1685137156
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 s+y+GV +++ +grW+A+I  +     +k+ +lg++ t eeAa+a++ a+ +++g+
  OWM63090.1  85 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTYNTQEEAAAAYDMAAIQYRGA 137
                 89****99**********988422...5*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MQTAQTLPLE EEAPFTEVSP GAYDSEEAAA RTYDLAALKY WGPDTTLNFS IDDYKKELKE  60
MQNLSKEEYL ASLRRRSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVLGNK YLYLGTYNTQ  120
EEAAAAYDMA AIQYRGANAV TNFDISNYID RLKKKGIHID LPHQLYQRIY NPSSIEPQLE  180
PEAPAPEKEQ QEDQAVQTKA EVVEELAVET KAEVMKAGEM ASATGLHYPK FSPCMDSSTI  240
IDDHVSDQDH PWNFCMDVEA GAYPSLHVSD LPFEKYSNHI ELPDVLGDCK GFDDDIHLIF  300
EVGSDHNDEL VISPECVLDN SSCDTGPNVL ETILERRGSG KGELSMSPIS STVSSPVSSS  360
TTTSVYCSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.39e-70AP2 family protein