PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM63194.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 214aa    MW: 23105.6 Da    PI: 4.844
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM63194.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157e-054264123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C +C++ F++   L  H++ H
  OWM63194.1 42 YECVYCKRGFTNAQALGGHMNIH 64
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MYMAESENPG GSDSSSGQKD QNHGKGEDMI VKEAEATGKR SYECVYCKRG FTNAQALGGH  60
MNIHRKDRAN KSFLSSSSPP KNIPAVSILT CFISPSNIIP DAPVASASPS IGLIPSELEK  120
FESRPSLEAL WSKLSSHSST ACPSLVSPTN YLESYLQVAM SSTSSSRGID HEEALGSNLS  180
LQVGSPDHVE DTDEKGDDRM EEIDLELRLG RRDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.18e-16C2H2 family protein