PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63312.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 199aa MW: 22838.7 Da PI: 9.9763

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63312.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.1	1.1e-19	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l++ ++ +G+++Wk++a + g++R++k+c++rw++yl OWM63312.1 18 RGAWTPEEDRKLAQIIEVHGPRRWKLVATKAGLNRCGKSCRLRWLNYL 65 89********************************************97 PP
2	Myb_DNA-binding	50.8	3.9e-16	71	116	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l OWM63312.1 71 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 116 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MPTAPNSSSR LSKGEANRGA WTPEEDRKLA QIIEVHGPRR WKLVATKAGL NRCGKSCRLR 60 WLNYLRPNIK RGNISDQEED LILRLHKLLG NRWSLIAGRL PGRTDNEIKN YWNSHLSKKI 120 KQKENHRRSM KSSQKDCSHY PNDATTGSGS IVRSDANEVA NSGFAHQDDR IFDLSNEGPM 180 NLEWMSRFLE MEESCFDFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	5e-53	MYB family protein