PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63318.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 269aa MW: 30245.1 Da PI: 5.4247

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63318.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.5e-16	3	50	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l d+++ +G g W+tI++ g++R++k+c++rw++yl OWM63318.1 3 KGAWTALEDKILTDYITAYGEGKWRTIPKQTGLKRCGKSCRLRWLNYL 50 79********************************************97 PP
2	Myb_DNA-binding	48	2.9e-15	56	98	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ T++E++l+++++ +lG++ W++Ia +++ gRt++++k++w+ OWM63318.1 56 RGNITPDEEDLIIRLHGLLGNR-WSLIAGRLP-GRTDNEIKNYWN 98 7999****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MKKGAWTALE DKILTDYITA YGEGKWRTIP KQTGLKRCGK SCRLRWLNYL RPDIKRGNIT 60 PDEEDLIIRL HGLLGNRWSL IAGRLPGRTD NEIKNYWNCC LAKRIRKENN REHIYLPNKV 120 KNTKNPKIPT PGPELEENGH RLVPSPAVAA ASLQLLLPLP KDPILNSGSV MNGDIVNDLP 180 TLEDESGNVS SSPLTSRDDL SSHIVAETGT SDIFDSVDFS TFDDFLFKQF DSVIEAGWSS 240 WESFEEADIS HFGPVDYAAL SYASDQWII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	6e-57	MYB family protein