PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63337.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Nin-like

Protein Properties

Length: 398aa MW: 44306.5 Da PI: 5.7927

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	78.6	6.7e-25	304	354	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + +++l dl+ yF+lp+++AA++L++c+Tv+KriCR+ G+kRWPhRkiks+ OWM63337.1 304 TGRLTLRDLAGYFHLPVEAAARKLNLCPTVVKRICRRGGLKRWPHRKIKSI 354 5689*********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MGDPWVVVPY HDPHDVSPLY SIQQHLLEDQ NPTLSDLYYP VPSNPNPNSS PCPSSDYSGR 60 IPPLGKGTRS RDPASNSLHD TLGPGTGSGS SSYTYAQCDP TGPGGSNGEA GPSSYAENLI 120 VKNAKPLSIW PEPPSPYSCS CCHLLREMVH SNGTHTTRLE LHGRVGMICH AILENRFCKR 180 GIEDVKQFLK QYCEERSQAG YVLLPDPLSK YYEAVCIGLV WDDSIFADAN DYFEYSAGIS 240 EEAPNEQPED APPANQQTEP MQNNQAPNEP PEDAPPTDQQ MEPEQNSQDG TNSRTFLAIQ 300 RERTGRLTLR DLAGYFHLPV EAAARKLNLC PTVVKRICRR GGLKRWPHRK IKSIERQISK 360 LQLMLASKNR EDKLFAQNEV ERLQNQIAII RYGVPEAP

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MGDPWVVVPY HDPHDVSPLY SIQQHLLEDQ NPTLSDLYYP VPSNPNPNSS PCPSSDYSGR  60
IPPLGKGTRS RDPASNSLHD TLGPGTGSGS SSYTYAQCDP TGPGGSNGEA GPSSYAENLI  120
VKNAKPLSIW PEPPSPYSCS CCHLLREMVH SNGTHTTRLE LHGRVGMICH AILENRFCKR  180
GIEDVKQFLK QYCEERSQAG YVLLPDPLSK YYEAVCIGLV WDDSIFADAN DYFEYSAGIS  240
EEAPNEQPED APPANQQTEP MQNNQAPNEP PEDAPPTDQQ MEPEQNSQDG TNSRTFLAIQ  300
RERTGRLTLR DLAGYFHLPV EAAARKLNLC PTVVKRICRR GGLKRWPHRK IKSIERQISK  360
LQLMLASKNR EDKLFAQNEV ERLQNQIAII RYGVPEAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	4e-13	Nin-like family protein