PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63356.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 121aa MW: 13948.3 Da PI: 5.7083

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63356.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	33.9	6.2e-11	100	121	1	22
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYG+K+vk+s++pr OWM63356.1 100 LDDGYKWRKYGKKMVKNSPNPR 121 59*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 121 aa Download sequence
MSDATFRSSE SPEMEFPDQS SFNLSDQFFT FEGWLEGDDP ALISPKYQHS QSYMPVVEIG 60 NSNTRTVTHH EGPSSSESGR ERKDVKERFA FKTKSEVEIL DDGYKWRKYG KKMVKNSPNP 120 R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	6e-17	WRKY family protein