PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63381.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 154aa MW: 17225.4 Da PI: 7.9673

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63381.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	43	1.2e-13	74	143	2	60
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHH............HHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSF............vRQLnmY 60 Fl+k+++i++d+++ ++++ws nsf+v+++++f++++LpkyF n++ F +RQLn+Y OWM63381.1 74 FLTKTFKIVDDPSMGRVVWWSVGRNSFIVWEPHRFSSTLLPKYFCCLNYH-FndllqalqllhfIRQLNTY 143 9******************999******************988876.33556666666669999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence
MDGGGRLRTA KQEEQTQALS SSSPHVTPTK SGGCSGSCDG PSSSSSSSWA NQNWDTRDLP 60 RPMEGLSEAG PPPFLTKTFK IVDDPSMGRV VWWSVGRNSF IVWEPHRFSS TLLPKYFCCL 120 NYHFNDLLQA LQLLHFIRQL NTYVSPLYLL SVWV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-29	HSF family protein