PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM63486.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 222aa    MW: 24612.5 Da    PI: 10.2534
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM63486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52.1e-124586349
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAve 49
                ++h+e+ErrRR+riN  +++Lr+l+P+       K++Ka+ L ++++
  OWM63486.1 45 KNHSEAERRRRQRINAHLATLRDLVPST-----DKMDKATLLAEVIN 86
                58*************************7.....6********99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MASRGGSSAK SQSLVLDSEK GELVKAPVRV AKKNVSEAKA KLALKNHSEA ERRRRQRINA  60
HLATLRDLVP STDKMDKATL LAEVINQVKV QKKTALESIR GLLIPLDSEE LTVETCDDIY  120
QHATVSFRAS LCCKYRPDLF ADLRQAVSSL GTMKLMKAEI STLEDWLKIV FLFTSCRDEP  180
RSAHGILSSS IYRSLSSVLD KAPASLEYSP KVAPSRKRQK VS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.15e-24bHLH family protein