PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM63576.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 195aa    MW: 22022.5 Da    PI: 4.7139
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM63576.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM128.36e-4081261128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrF Ptdeelvv++L++k++  +++  +vi+++d+y ++Pw+L+ k+ ae ++wy+Fs+r +         r+t++gyWk  g d++++++ +e 
  OWM63576.1   8 LPPGFRFYPTDEELVVHFLHRKAALLPCHP-DVIPDLDLYPYDPWELEGKALAEGNKWYYFSRRTQ--------DRVTDNGYWKPLGVDEPIVTSANER 97 
                 79*************************999.99***************77778899******9854........799********************** PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 vg+kk +vfy g+ap g kt+W+mheyrl
  OWM63576.1  98 VGMKKYFVFYVGEAPGGMKTNWIMHEYRL 126
                 ***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MGDNNVNLPP GFRFYPTDEE LVVHFLHRKA ALLPCHPDVI PDLDLYPYDP WELEGKALAE  60
GNKWYYFSRR TQDRVTDNGY WKPLGVDEPI VTSANERVGM KKYFVFYVGE APGGMKTNWI  120
MHEYRLFSGG GPSTSSGGRS SSKRKGNTRT DYSKWVLCRV HERDGDGDAG DGDGTDLSCL  180
DEVFLSLDDL DEITN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.11e-76NAC family protein