PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63603.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 827aa MW: 91379.7 Da PI: 4.8224

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63603.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00053	372	395	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C +C+++Fs k+++ +H+ + H OWM63603.1 372 FECYKCNTTFSEKDSYLQHLVSfH 395 89*****************98877 PP

Sequence ? help Back to Top
Protein Sequence Length: 827 aa Download sequence
MVTVSAATLG PEPENVTLVD MSKLSQSELQ ALSLRSSSSS LHRQLAFSDQ LFLPKIDRSV 60 FNESAGSRQQ TYSRPDSAFS SSSSSSVAAA GHHHRNRIAG LFPVPKLPAL PLDDDPERRE 120 NVAIIRTLKH YISQNPSPSF THIDLIPPSL PAPVGVSSDG LASFEGERKR KRGRKPKVKM 180 NLNVEQKIEI EPMGALEMKN KNGVVIDVDS LVGLEDPYGE ELRKRTEGLQ SEEELLAFMR 240 DLGGEWGSRR KRRKIVDAGI FGDFLPIGWK LLLGLRRKEG RASVFCRRYV RSYLGLPAAS 300 ESLIQSANDN QQDCRVDIMH QCAGQVVKDD SHSLHILSSP TAPTHSLQNA LDKKANSIGA 360 ENLAEVQVND LFECYKCNTT FSEKDSYLQH LVSFHQRTMR RYRIGSSVGD GVIMKDGKFE 420 CQFCHKVFEE RRRYSGHVGI HVRNYVRRKE ELSGQGSTLN KMESSSGNEL PSRISKMDAL 480 IEIAQSSIME NSTAGNHHKL SGIYPNCRPN ESIAGFASKA NAHSDMKVDS SISDLRMENT 540 DSEQTLDEEL TDNEDECVIT DVKGKLKEDS DDSSDVNMDM DCEKRVAESV DGQNDNTNVK 600 CSGDDCQTEA FFDLPKTGAA DGKDSESSLI LLNGNLASIR PPEYLESDGK MLETTDGNTR 660 HAELDTAVMQ SPQQNPDSNI QQSGTPDRVS KGEDKICSID QREDNLAPFE ELRYDGIEPL 720 EFQFVTMEEE SHPMPEEPID MTTTSAMEGQ YDSSIPFGSE ELTLDQMTTG HQRASSCVWC 780 GVEFSHEATD SDVQSDSVGF MCPACKVKIS GQLNAFGNGS PADSNCL

Sequence ? help Back to Top

Protein Sequence Length: 827 aa Download sequence

MVTVSAATLG PEPENVTLVD MSKLSQSELQ ALSLRSSSSS LHRQLAFSDQ LFLPKIDRSV  60
FNESAGSRQQ TYSRPDSAFS SSSSSSVAAA GHHHRNRIAG LFPVPKLPAL PLDDDPERRE  120
NVAIIRTLKH YISQNPSPSF THIDLIPPSL PAPVGVSSDG LASFEGERKR KRGRKPKVKM  180
NLNVEQKIEI EPMGALEMKN KNGVVIDVDS LVGLEDPYGE ELRKRTEGLQ SEEELLAFMR  240
DLGGEWGSRR KRRKIVDAGI FGDFLPIGWK LLLGLRRKEG RASVFCRRYV RSYLGLPAAS  300
ESLIQSANDN QQDCRVDIMH QCAGQVVKDD SHSLHILSSP TAPTHSLQNA LDKKANSIGA  360
ENLAEVQVND LFECYKCNTT FSEKDSYLQH LVSFHQRTMR RYRIGSSVGD GVIMKDGKFE  420
CQFCHKVFEE RRRYSGHVGI HVRNYVRRKE ELSGQGSTLN KMESSSGNEL PSRISKMDAL  480
IEIAQSSIME NSTAGNHHKL SGIYPNCRPN ESIAGFASKA NAHSDMKVDS SISDLRMENT  540
DSEQTLDEEL TDNEDECVIT DVKGKLKEDS DDSSDVNMDM DCEKRVAESV DGQNDNTNVK  600
CSGDDCQTEA FFDLPKTGAA DGKDSESSLI LLNGNLASIR PPEYLESDGK MLETTDGNTR  660
HAELDTAVMQ SPQQNPDSNI QQSGTPDRVS KGEDKICSID QREDNLAPFE ELRYDGIEPL  720
EFQFVTMEEE SHPMPEEPID MTTTSAMEGQ YDSSIPFGSE ELTLDQMTTG HQRASSCVWC  780
GVEFSHEATD SDVQSDSVGF MCPACKVKIS GQLNAFGNGS PADSNCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	176	ERKRKRGRKP