PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM63685.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 299aa    MW: 34321 Da    PI: 4.858
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM63685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.85e-2471613128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpk................................kvkaeekewyfFskr 64 
                  G+ F+Pt +el+  yLk+++ +        +  + i+++++ +++P++Lp+                                +v+++ ++w+fF+ r
  OWM63685.1   7 LGLNFSPTGSELL-IYLKQRILDYFedpyySRSRHLIPDIELPDWDPKELPHqynskcfgkslrshnptlryfanhlgvytglsAVRSNGRQWFFFCFR 104
                 599**********.99***99887656775455456***************558999**9999999999999999998888877667788899999997 PP

         NAM  65 dkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++++        +++ gyWk t +dk+v+++ ++e+ g kktL+fy+gr p+g+ t+W mhey+l
  OWM63685.1 105 KERT--------VANVGYWKITSSDKKVKCEdTREELGRKKTLTFYRGRVPNGKLTNWGMHEYHL 161
                 5532........6788*************9967788****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MEMPPILGLN FSPTGSELLI YLKQRILDYF EDPYYSRSRH LIPDIELPDW DPKELPHQYN  60
SKCFGKSLRS HNPTLRYFAN HLGVYTGLSA VRSNGRQWFF FCFRKERTVA NVGYWKITSS  120
DKKVKCEDTR EELGRKKTLT FYRGRVPNGK LTNWGMHEYH LNQSYLGYNI DEMPFVVCCV  180
FKRSGNIDYD NDDKSTFHEE VLSNNAATPE SPSPTNRSAS TVSEEVWQSL PDIQELPSDS  240
YAIGGDLVEE PIIYDSYADA AGPSLEGLFD GNSSNNYSAS TLETDDYNQQ YQGGWNSFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.12e-22NAC family protein