PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM63818.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

ARR-B

Protein Properties

Length: 501aa MW: 57115.8 Da PI: 6.6493

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM63818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	81.5	9.2e-26	212	266	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W + LH++Fv+av+ L G+++A+Pk+ilelm+v+gLt+e+v+SHLQkYR + OWM63818.1 212 KQRVVWDSALHDQFVSAVTYL-GINEAVPKKILELMNVPGLTRENVASHLQKYRQH 266 79*****************.9*****************************86 PP
2	Myb_DNA-binding	31.6	3.9e-10	214	264	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W +++++v av+ lG + +k+I + m+ g+t++++ s++qky+ OWM63818.1 214 RVVWDSALHDQFVSAVTYLGINeaVPKKILELMNvPGLTRENVASHLQKYR 264 678***********************************************7 PP
3	Response_reg	54.6	6.3e-19	38	146	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +l+ dD++ +++lr++le+ +y ev ++++ e+ale+l++++ +Dl+l +gmdG++ll+ i e ++p+i++++ + + +++ ++ G OWM63818.1 38 LLVLDDDEGHLHVLRKMLEECQY-EVISCTQVESALEKLRQNKdvFDLLLSNDIVSGMDGFNLLRDISMEF-DIPVIIMSGDDRRTRIIKSIEHGFC 132 4788*****************.9999*******888889******************9988.9******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +l+Kp+++++l++ OWM63818.1 133 ACLVKPIQKKALMD 146 ********9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MNGDHKGTLI SEAGSKSDPA SVAIGDNDLP SNLVVLKLLV LDDDEGHLHV LRKMLEECQY 60 EVISCTQVES ALEKLRQNKD VFDLLLSNDI VSGMDGFNLL RDISMEFDIP VIIMSGDDRR 120 TRIIKSIEHG FCACLVKPIQ KKALMDIWKH VIQKRKCKFK DLVRVRGPEN RNSPEPNFDH 180 AHKSPKNSKR KNNGGDSSEH EQNDAILTPM KKQRVVWDSA LHDQFVSAVT YLGINEAVPK 240 KILELMNVPG LTRENVASHL QKYRQHQKKK AQESLESTFG PMSSDGNLDL HELIGHENWK 300 INMSERHQRR QMMKHKESHQ YQYLQTSQNM NMHVEMAPSY QTTQPMMSGN SGNPIVSSGV 360 AEANFPYGCN TIEMGREEAY HPVLQTPSSF EFPIYSHLEN QLYGLPFVHD FSQIGLQDWE 420 LNFQHENIIP DQPHEDTIPR EGTINLDMQR NIPSGDNAQM VRHIGVHGTK SFVELVEILS 480 KRYCPSLLKV RDAWDKKSPI D

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MNGDHKGTLI SEAGSKSDPA SVAIGDNDLP SNLVVLKLLV LDDDEGHLHV LRKMLEECQY  60
EVISCTQVES ALEKLRQNKD VFDLLLSNDI VSGMDGFNLL RDISMEFDIP VIIMSGDDRR  120
TRIIKSIEHG FCACLVKPIQ KKALMDIWKH VIQKRKCKFK DLVRVRGPEN RNSPEPNFDH  180
AHKSPKNSKR KNNGGDSSEH EQNDAILTPM KKQRVVWDSA LHDQFVSAVT YLGINEAVPK  240
KILELMNVPG LTRENVASHL QKYRQHQKKK AQESLESTFG PMSSDGNLDL HELIGHENWK  300
INMSERHQRR QMMKHKESHQ YQYLQTSQNM NMHVEMAPSY QTTQPMMSGN SGNPIVSSGV  360
AEANFPYGCN TIEMGREEAY HPVLQTPSSF EFPIYSHLEN QLYGLPFVHD FSQIGLQDWE  420
LNFQHENIIP DQPHEDTIPR EGTINLDMQR NIPSGDNAQM VRHIGVHGTK SFVELVEILS  480
KRYCPSLLKV RDAWDKKSPI D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	4e-56	ARR-B family protein