PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM63942.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB
Protein Properties Length: 326aa    MW: 37019.3 Da    PI: 10.2073
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM63942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding582.2e-181964147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+q+G+ +W++Ia++++ gR++k+c++rw++ 
       OWM63942.1 19 RGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQ-GRSGKSCRLRWFNQ 64
                     899*****************************.***********996 PP
2Myb_DNA-binding59.38.3e-1971114146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T+eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ 
       OWM63942.1  71 RRPFTEEEEERLLAAHRVHGNK-WALIARLFP-GRTDNAVKNHWHV 114
                      679*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MDEFGDEGKV AGGAAGCPRG HWRPAEDEKL RQLVEQYGPQ NWNSIAEKLQ GRSGKSCRLR  60
WFNQLDPRIN RRPFTEEEEE RLLAAHRVHG NKWALIARLF PGRTDNAVKN HWHVIMARKQ  120
REQSKLSAKR GSGQPNSSSS MTDSSKAMFC RKPQELQEEV INSCFKFESS GRTRFFEFQN  180
PGSKDRIPVL PSLMSSSPSW TSTPRMVPVS SSLDFFEKER RGQVLNFPNS SMHRGHIEAS  240
TGLDFLNYRR FDPGHFGNFR VGRSYGSTGE AATIRDQTSN FSNDQAFLRW EVNSRQVQVG  300
GDQNESVKLR KDVPFIDFLG VGVSTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.15e-64MYB family protein