PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM63958.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family HSF
Protein Properties Length: 322aa    MW: 35439.5 Da    PI: 4.8406
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM63958.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.85.6e-36241142101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d+++++lisw+e+g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++g+k ll++i+
    OWM63958.1  24 FLTKTYQLVDDPAVDDLISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFRRGEKGLLRDIQ 111
                   9*****************************************************************99.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r+k
    OWM63958.1 112 RRK 114
                   *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MPPPVEQAGE SPAGESQRSL PTPFLTKTYQ LVDDPAVDDL ISWNEDGTTF IVWRPAEFAR  60
DLLPKYFKHN NFSSFVRQLN TYGFRKVVPD RWEFANDCFR RGEKGLLRDI QRRKISLAAA  120
TVTLAAVGTV TPTNSGDEQV LSSNSPPVAV AAASTSAATL HRSPSCTTTP ELLEENDRLK  180
KENMQMSHEL SHLRGLCNNI LSLMAGYVSR QSDSNTAPEG QQPLELMPRR QAPPPAGEEG  240
CASVAAGGEE VNPRLFGVSI GVKRMRMAAA TADENGDEMR EREQDQDQVQ QSMDKETGSQ  300
VKSEPPDGNA DHQDRSWLEL GK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.12e-97HSF family protein