PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM63981.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 256aa    MW: 27256.5 Da    PI: 9.7333
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM63981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.88.7e-213888256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g+
  OWM63981.1 38 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRGN 88
                7********.**********7.....337*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MEHMPFVAPA TATPPTASGH PASSHDEAGV VGAERRRRYR GVRQRPWGKW AAEIRDPHKA  60
ARVWLGTFDT AEAAARAYDE AALRFRGNRA KLNFPENVRM LPQGVQTYTS GPALAVSNAP  120
VAAHQVVPPA PPEQPPGLGG LRPPTGPVPD IARDYWLQDP YSQLISGQNT VGLLEHMMLP  180
QSQMGSLQSS INTSSFLSSS SAPSSASVSI PLIFSEQQLA YPRPPPRDSH QGGGRADVAA  240
PPWSAGSSSQ HPPSTG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13439ERRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.17e-16ERF family protein