PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64191.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family HD-ZIP
Protein Properties Length: 836aa    MW: 89917.3 Da    PI: 6.2161
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64191.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.14.7e-21143198156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k
  OWM64191.1 143 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 198
                 688999***********************************************999 PP
2START202.91.4e-633445691206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela++a++elvk+a+ +ep+W +s     e++n de+l++f++  +     + +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t++vis
  OWM64191.1 344 ELALAAMDELVKMAQTDEPLWIRSLesgrEILNHDEYLRTFTPCIGmkpagFVTEASRETGMVIINSLALVETLMDSN-RWAEMFPcliaRTATTDVIS 441
                 5899**************************************9999********************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgrlp 177
                 sg      galqlm aelq+lsplvp R++ f+R+++ql +g+w++vdvS+d  ++ p+  +s+  +++lpSg+++++++ g+skvtwveh++++++++
  OWM64191.1 442 SGmggtrnGALQLMHAELQVLSPLVPvREVNFLRFCKQLAEGVWAVVDVSIDAIRETPSgPPSYLSCRRLPSGCVVQDMPSGYSKVTWVEHAEYDEAQI 540
                 **********************************************************999************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 178 hwllrslvksglaegaktwvatlqrqcek 206
                 h+l+r+l++++l +ga++wvatlqrqc++
  OWM64191.1 541 HELYRPLISTSLGFGAQRWVATLQRQCQC 569
                 ***************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 836 aa     Download sequence    
MSFGGFLDST TSSSSGGGLV GDKAISLPYN NNTGSSRKDE PSSINMPSGA ISQPRLVAPS  60
LAKSMFNSPG LSLALQTGIE SHGDVTRLGD GNFEAAAAAV AGMMNRRSRD ALDQEHESRS  120
GSDNMDGTAS GDDQDAADKP PRKKRYHRHT PQQIQELEAL FKECPHPDEK QRLELSKRLC  180
LETRQVKFWF QNRRTQMKTQ LERHENSLLR QENDKLRGEN MSLRDAMRNP ICTNCGGPAI  240
MGEISLEEQH LRIENSRLKD ELDRVCALAG KFLGRPITSF GGPIPPQLPN SSLELGVGGN  300
GFGGLGPLPD FVAGGIAGSL PVVPSARSGI PGLDRSVERS MLLELALAAM DELVKMAQTD  360
EPLWIRSLES GREILNHDEY LRTFTPCIGM KPAGFVTEAS RETGMVIINS LALVETLMDS  420
NRWAEMFPCL IARTATTDVI SSGMGGTRNG ALQLMHAELQ VLSPLVPVRE VNFLRFCKQL  480
AEGVWAVVDV SIDAIRETPS GPPSYLSCRR LPSGCVVQDM PSGYSKVTWV EHAEYDEAQI  540
HELYRPLIST SLGFGAQRWV ATLQRQCQCL AILMSSSVPS RDQTAITASG RKSMLKLAQR  600
MTANFCAGVC ASTVHKWNKL SAGGAGDEDV RVMTRKSVDD PGEPSGIVLS AATSVWLPVS  660
PQRLFDFLRD EHQRSEWDIL SNGGPMQEMA HIAKGQDHGN CVSLLRASAM NSNQSSMLIL  720
QETCIDASGS LVVYAPVDIP AMHVVMNGGD SAYVALLPSG FAIVPDGSAP APGGPAAAAS  780
ANGGPQRAGG SLLAVAFQIL VNSLPTAKLT VESVDTVKNL ISCTIQKIKV ALQCEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein