PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64230.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 297aa MW: 33131.6 Da PI: 6.0619

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.3	4.1e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde+lv+++++ G g+W++ ++ g+ R++k+c++rw +yl OWM64230.1 14 RGPWTPEEDEILVQYITKNGHGNWSSLPQLAGLLRCGKSCRLRWTNYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	49.9	7.4e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++l ++++ lG++ W++Ia ++ gRt++++k+ w+++l OWM64230.1 67 RGPFTPEEEKLVIQLHGILGNR-WASIAGQLP-GRTDNEIKNLWNTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MGRKPCCVNK ELKRGPWTPE EDEILVQYIT KNGHGNWSSL PQLAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF TPEEEKLVIQ LHGILGNRWA SIAGQLPGRT DNEIKNLWNT HLKKRLLLMG 120 LDPQTHEPFP LGGVGPKKSP ATPATRHMAQ WESARLEAEA RLSRESLLVN PPPMVKSDSD 180 FFLLLWNSEV GDSFRRINVE EKTPPSQSPI SQASSSAKGK PALASSSRTE NDRLEDMEFG 240 SCKSYLELMA GSDSSCSSEL EDASDTALQL LLDFPINNDM SFLEESTDPY GMCTSML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-121	MYB family protein