PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64280.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 191aa MW: 21337.7 Da PI: 8.8007

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.7	1.8e-31	112	170	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s +prsYYrC++++C+vkk+v+r +ed+++v++tYeg Hnh+ OWM64280.1 112 LDDGYRWRKYGQKAVKNSIYPRSYYRCAHHTCNVKKQVQRLSEDTSTVVTTYEGVHNHP 170 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MEGREPPQDL PDHLFVSSSD HPAPSEPSSS QLPRDLDWVS SFLQLPPYHG GSNDATGAGS 60 SSLVGGGAPV NADEEERNVG GKERRKAGGG HRTRKATRPR FAFRTRSSED ILDDGYRWRK 120 YGQKAVKNSI YPRSYYRCAH HTCNVKKQVQ RLSEDTSTVV TTYEGVHNHP CEQLMEALAP 180 LLRQIQFLSK F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46130.1	7e-57	WRKY family protein