PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64388.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 201aa    MW: 22473.4 Da    PI: 8.9261
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.56.4e-084262346
                     -HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                     +W++Ia +++ gRt++++k++w++
       OWM64388.1  4 RWSLIAGRLP-GRTANDLKNFWNT 26
                     5*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MACRWSLIAG RLPGRTANDL KNFWNTRLVK KGNATRKDMS HHHHQKHKPQ NLVKVNVIKP  60
RPRTFKSFAP MRLQTGEVAA TTLMAMPPSC QIVLPRDEQL ISSQPSALLH RVAQPVPASL  120
ENDVSWWESL LSSSEKAISD QVGDSTATTS NSNTNSKNNL LSGDFWSQEM VDEGQQLNNG  180
WNNELFDDVA LSWCELLGAK Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.14e-16MYB family protein