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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OWM64501.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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| Family | GRAS | ||||||||
| Protein Properties | Length: 427aa MW: 47783.1 Da PI: 7.7335 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 312.2 | 1.2e-95 | 42 | 425 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99
l++lLl+cA++vssg+l++a+a+L ++sela +gd+mqRl a ++ +La rl++ +++lykal+ ++ + + +e a++++ +P+l f+ +
OWM64501.1 42 LIQLLLSCAKHVSSGNLHRADAYLRQISELALVSGDSMQRLSAWMASGLAVRLVKCWPGLYKALNFTKLH--KPAELPLAQSIYTPHFPYLGFACSVVA 138
689*****************************************************************98..5888889999***************** PP
GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
+++++++ +ee vH++D++ ++ W +Ll+ La+ ++gpp+l++T v s +k le++g+ L k Ae+l+vpf+fn+ v +l dl++e+L+ ++
OWM64501.1 139 RTLVRSLWREEVVHVVDLGSGNVRLWSPLLKGLAQLAGGPPHLKVTCVCS----RKSVLETLGHGLVKEAETLEVPFQFNP-VNAHLRDLTMEMLNPRS 232
**************************************************....9**************************.799************** PP
GRAS 199 gEalaVnlvlqlhrll...............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres... 279
gE +++ +vl lh ll + sv+ ++ e+L +v+slsPk++ +veqea+ n++++++rf+e+l+yysa+fds++a++++
OWM64501.1 233 GEIMIIVSVLGLHALLaqddrvdaqfvagksSTSVKECKQMGEFLAMVRSLSPKIFFLVEQEANQNTNRLVDRFVECLHYYSAMFDSIDASYGASLlcn 331
*****************************6544555555899***********************************************9977654454 PP
GRAS 280 .eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
er +E++ lgrei+n+++ceg er+erhe+ +W r+++aGFkpv+l + ++ k + ++ dgy+v e+++ ++ W++rpL++vSaW
OWM64501.1 332 qLERLALEEM-LGREIENILSCEGLEREERHERHVSWTVRFSRAGFKPVRLWLDPSNDEKGMFETRVPDGYKVVTERACTMISWHERPLYAVSAW 425
499******9.****************************************************99999*************************** PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 427 aa Download sequence |
MNSSISPSSS PSTSKPDVTL SLKTSPSHAQ ESFRPEERGV RLIQLLLSCA KHVSSGNLHR 60 ADAYLRQISE LALVSGDSMQ RLSAWMASGL AVRLVKCWPG LYKALNFTKL HKPAELPLAQ 120 SIYTPHFPYL GFACSVVART LVRSLWREEV VHVVDLGSGN VRLWSPLLKG LAQLAGGPPH 180 LKVTCVCSRK SVLETLGHGL VKEAETLEVP FQFNPVNAHL RDLTMEMLNP RSGEIMIIVS 240 VLGLHALLAQ DDRVDAQFVA GKSSTSVKEC KQMGEFLAMV RSLSPKIFFL VEQEANQNTN 300 RLVDRFVECL HYYSAMFDSI DASYGASLLC NQLERLALEE MLGREIENIL SCEGLEREER 360 HERHVSWTVR FSRAGFKPVR LWLDPSNDEK GMFETRVPDG YKVVTERACT MISWHERPLY 420 AVSAWSC |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G50420.1 | 3e-90 | GRAS family protein | ||||




