PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64501.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 427aa    MW: 47783.1 Da    PI: 7.7335
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS312.21.2e-95424251373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lLl+cA++vssg+l++a+a+L ++sela  +gd+mqRl a ++ +La rl++ +++lykal+ ++ +  + +e   a++++   +P+l f+  +  
  OWM64501.1  42 LIQLLLSCAKHVSSGNLHRADAYLRQISELALVSGDSMQRLSAWMASGLAVRLVKCWPGLYKALNFTKLH--KPAELPLAQSIYTPHFPYLGFACSVVA 138
                 689*****************************************************************98..5888889999***************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 +++++++ +ee vH++D++ ++   W +Ll+ La+ ++gpp+l++T v s    +k  le++g+ L k Ae+l+vpf+fn+ v  +l dl++e+L+ ++
  OWM64501.1 139 RTLVRSLWREEVVHVVDLGSGNVRLWSPLLKGLAQLAGGPPHLKVTCVCS----RKSVLETLGHGLVKEAETLEVPFQFNP-VNAHLRDLTMEMLNPRS 232
                 **************************************************....9**************************.799************** PP

        GRAS 199 gEalaVnlvlqlhrll...............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres... 279
                 gE +++ +vl lh ll               + sv+  ++  e+L +v+slsPk++ +veqea+ n++++++rf+e+l+yysa+fds++a++++     
  OWM64501.1 233 GEIMIIVSVLGLHALLaqddrvdaqfvagksSTSVKECKQMGEFLAMVRSLSPKIFFLVEQEANQNTNRLVDRFVECLHYYSAMFDSIDASYGASLlcn 331
                 *****************************6544555555899***********************************************9977654454 PP

        GRAS 280 .eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                   er  +E++ lgrei+n+++ceg er+erhe+  +W  r+++aGFkpv+l  +  ++ k + ++   dgy+v  e+++ ++ W++rpL++vSaW
  OWM64501.1 332 qLERLALEEM-LGREIENILSCEGLEREERHERHVSWTVRFSRAGFKPVRLWLDPSNDEKGMFETRVPDGYKVVTERACTMISWHERPLYAVSAW 425
                 499******9.****************************************************99999*************************** PP

Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    
MNSSISPSSS PSTSKPDVTL SLKTSPSHAQ ESFRPEERGV RLIQLLLSCA KHVSSGNLHR  60
ADAYLRQISE LALVSGDSMQ RLSAWMASGL AVRLVKCWPG LYKALNFTKL HKPAELPLAQ  120
SIYTPHFPYL GFACSVVART LVRSLWREEV VHVVDLGSGN VRLWSPLLKG LAQLAGGPPH  180
LKVTCVCSRK SVLETLGHGL VKEAETLEVP FQFNPVNAHL RDLTMEMLNP RSGEIMIIVS  240
VLGLHALLAQ DDRVDAQFVA GKSSTSVKEC KQMGEFLAMV RSLSPKIFFL VEQEANQNTN  300
RLVDRFVECL HYYSAMFDSI DASYGASLLC NQLERLALEE MLGREIENIL SCEGLEREER  360
HERHVSWTVR FSRAGFKPVR LWLDPSNDEK GMFETRVPDG YKVVTERACT MISWHERPLY  420
AVSAWSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.13e-90GRAS family protein