PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM64558.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 350aa    MW: 39386.8 Da    PI: 4.6388
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM64558.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-174998255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d      ++ r++lg+f ta+eAa+a+++a+  l+g
  OWM64558.1 49 HFIGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFETAKEAARAYDEAACLLRG 98
                689******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MARKRKSTER MEEKKESSNE DQNPMTWDEM LKEAAAVAAL SGARRPRKHF IGVRQRPSGR  60
WVAEIKDTIQ KIRVWLGTFE TAKEAARAYD EAACLLRGAN TRTYFWPASA APESSFLPAP  120
PSKVTNLVLQ RLRERNHARD SGLAPACIDQ KQEQVVDSFI HFLNDPDNCI VEDDKHSNNA  180
GSPVMTSESC LTEKENSGDK SSDDARSSSD GSNPVERADY RGEEKVEEEE SLDLRDIDFH  240
FLDDVRSPVL CSPFEMAEEI VEPMEPENDS EEPSIQRMKC ERKFSASLYA FSGIPECLKR  300
KQESINKLAK GISEQLKDPN NAENRETMDA NDGELSLWSS LDPPPICSVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.18e-21ERF family protein