PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64561.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 383aa MW: 42331.5 Da PI: 8.1455

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v +G+g+W++++++ g++R++k+c++rw +yl OWM64561.1 14 RGLWTAEEDAKILAYVSAHGTGNWTLVPKKAGLNRCGKSCRLRWTNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	50	7e-16	69	110	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T+eE++l++d +k G++ W+ Iar ++ gRt++++k++w++ OWM64561.1 69 SFTPEEEQLIIDFHKAIGSR-WSMIARQLP-GRTDNDVKNYWNT 110 79****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MGRPPCCDKL NVKRGLWTAE EDAKILAYVS AHGTGNWTLV PKKAGLNRCG KSCRLRWTNY 60 LRPDLKHESF TPEEEQLIID FHKAIGSRWS MIARQLPGRT DNDVKNYWNT KLRKKLAKMG 120 IDPVTHKPIP QVMSEYGNIN RLPDSTSLVR STARSAPRSP SSILPRLPMI NHMTRNHNSS 180 QKPNSLAGQP DQNLWPGISA AAWDQLLRQF QENNIDQETM RQPQHFMNEV TSSSSSSSSS 240 TVTTQLLNSS SPGSFGSSQA HIPRPPFTRP DLLPSDPLAL GVDLQKQCSS FQSGIFTPGA 300 GHEPPSLTED QACVGISTLG NGPARDITAY NTGVPPYQAA PGDQLNHLYE AASPGNSFID 360 SILDRDSQIR PDFPELLDGF FDY

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MGRPPCCDKL NVKRGLWTAE EDAKILAYVS AHGTGNWTLV PKKAGLNRCG KSCRLRWTNY  60
LRPDLKHESF TPEEEQLIID FHKAIGSRWS MIARQLPGRT DNDVKNYWNT KLRKKLAKMG  120
IDPVTHKPIP QVMSEYGNIN RLPDSTSLVR STARSAPRSP SSILPRLPMI NHMTRNHNSS  180
QKPNSLAGQP DQNLWPGISA AAWDQLLRQF QENNIDQETM RQPQHFMNEV TSSSSSSSSS  240
TVTTQLLNSS SPGSFGSSQA HIPRPPFTRP DLLPSDPLAL GVDLQKQCSS FQSGIFTPGA  300
GHEPPSLTED QACVGISTLG NGPARDITAY NTGVPPYQAA PGDQLNHLYE AASPGNSFID  360
SILDRDSQIR PDFPELLDGF FDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	1e-77	MYB family protein