PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM64572.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Dof

Protein Properties

Length: 485aa MW: 52085.7 Da PI: 5.8533

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM64572.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.9	6.3e-40	129	189	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s OWM64572.1 129 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSA 189 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MSGEPKDPAI KLFGKTIPLP EIPPEAAPVD SNLTHETGPP PEEDCVRADK EEKEDSKETS 60 KGNPTTSTQE DETLRPIGED STDPDAASGI SENNKTTSVD KESATQKPSK SDEEQSETSN 120 TQEKPLKKPD KILPCPRCNS MDTKFCYYNN YNVNQPRHFC KNCQRYWTAG GTMRNVPVGA 180 GRRKNKSSAS HYHRHITVSE ALQNVVPNGV HPVKPNGTVL AFGSSDTPLC ESMASVLNLA 240 DKTMRVNPRN GFHKPDGVIM PGACSENRLD PLNGSSAMGP NSKDAEGKDG TVPGFVTQIP 300 CYPGAPWPYP WNSGQWGPTL PPPPPYCPPG FAVPFFPAAA AYWGCSVPGA WNFPWVPGPS 360 SPVTNSTGSG PNSPTLGKHS RDEQNVLKQS GGGGEDDEPT KEASAEKCLW IPKTLRIDDP 420 GEAAKSSIWA TLGIKNDKAE PVSGGGLFKA FQSKSEERNH SSEASPLLQA NPAALSRSVN 480 FHESS

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MSGEPKDPAI KLFGKTIPLP EIPPEAAPVD SNLTHETGPP PEEDCVRADK EEKEDSKETS  60
KGNPTTSTQE DETLRPIGED STDPDAASGI SENNKTTSVD KESATQKPSK SDEEQSETSN  120
TQEKPLKKPD KILPCPRCNS MDTKFCYYNN YNVNQPRHFC KNCQRYWTAG GTMRNVPVGA  180
GRRKNKSSAS HYHRHITVSE ALQNVVPNGV HPVKPNGTVL AFGSSDTPLC ESMASVLNLA  240
DKTMRVNPRN GFHKPDGVIM PGACSENRLD PLNGSSAMGP NSKDAEGKDG TVPGFVTQIP  300
CYPGAPWPYP WNSGQWGPTL PPPPPYCPPG FAVPFFPAAA AYWGCSVPGA WNFPWVPGPS  360
SPVTNSTGSG PNSPTLGKHS RDEQNVLKQS GGGGEDDEPT KEASAEKCLW IPKTLRIDDP  420
GEAAKSSIWA TLGIKNDKAE PVSGGGLFKA FQSKSEERNH SSEASPLLQA NPAALSRSVN  480
FHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-109	Dof family protein